RDM Solutions for OMICS

Thursday 5 Jun 2025, 08:00 → 22:00 Europe/Berlin

Borstel

Aim

The workshop’s aim is initiating the setup of OMICS data management systems at several  institutions and harmonizing them with those systems already in use at other  institutions. Specifically, we want to gain an overview of

• suitable research data management systems
• their national and international embedding
• their strategy in relation to OMCIS data storage and archiving
• interoperability with other systems
• data brokering to public OMICs repositories.

 

Free of charge

The workshop is free of charge. If needed, we have limited resources to pay for your  travel-  and/or accommodation costs. Please get in touch.

10:00 → 16:00 RDM Solutions for OMICS: Presentations

10:00 Welcome and Introduction

10:05 The OMICS working group in the FDM-SH initiative

Speaker: Benjamin Slowig (CAU Kiel, FDM-SH)

10:15 OMICS Research Data Management at FZB

Speaker: Inken Wohlers (Forschungszentrum Borstel, Leibniz Lungenzentrum)

10:25 Practical implementation of good research practice (GRP) in RDM

Speaker: Andra Schromm (FZB)

10:35 OMICS-RDM at the MPI for Evolutionary Biology

Speaker: Carsten Fortmann-Grote (Max Planck Institute for Evolutionary Biology)

10:45 Research Data Management at LIV: current status and outlook

Speaker: Maya Topf (Leibniz Institute of Virology / Centre for Structural Systems Biology)

10:55 Current omics data management practices at the Bernhard Nocht Institute for Tropical Medicine

Speaker: Jan Strauss (Bernhard Nocht Institute for Tropical Medicine, Hamburg)

11:05 Research Data Management and Analysis using Disease Maps in the RTG SYLOBIO

Speaker: Matti van Welzen (Uni Rostock)

11:15 OMICS RDM in DZL

Speaker: Raphael Majeed (DZL)

11:25 Coffee Break

11:35 German Human Genome-Phenome Archive as a tool for Sharing Human Omics Data - Current Status and Future Plans

Speaker: Jan Eufinger (DKFZ / GHGA)

12:05 FAIR and Open resources for microbiome research

Speaker: Noriko Cassmann (FSU Jena, NFDI4Microbiota)

12:35 Lunch Break

13:15 Research Data Management with ELN-LIMS openBIS

Speaker: Kuzyakiv Rostyslav (ETH Zürich)

13:45 Aruna: a shared system for managing data in the Research Data Commons

Speaker: Frank Förster (Uni Giessen)

14:15 FAIRDOM SEEK software for data management and some use cases

Speaker: Wolfgang Müller (HITS gGmbH - Heidelberger Institut für Theoretische Studien)

14:45 Coffee Break

15:00 Enabling FAIR omics data using DataHub

Speaker: Niels Geudens (VIB)

15:30 Data Brokering for OMICS Data

Speaker: Jimena Linares

15:45 Data Integration and Repositories for Lipidomics

Speaker: Dominik Schwudke

16:00 → 17:15 RDM Solutions for OMICS: Discussion / Workshop on DFG Funding

16:00 DFG Funding Impulse talk

Speaker: Inken Wohlers (FZB)

16:10 Workshop on DFG funding for RDM initiative

• Vertikale Einbettung
• Horizontale Einbettung
• Fokus
• humandaten?
• nur mikrobiom?
• welche *omics?
• wo systeme aufsetzen
• Aufgabeteilung/Harmonisierung
• Welche Systeme sind von Interesse
• Wer beabsichtigt ein System aufzusetzen?

16:55 Wrap-up and Workshop Closing