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OMEROthon

6–8 May 2026
Max Planck Institute for Evolutionary Biology
Europe/Berlin timezone

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Session

Workshop

6 May 2026, 10:00
Interim Lecture Hall (Max Planck Institute for Evolutionary Biology)

Interim Lecture Hall

Max Planck Institute for Evolutionary Biology

August-Thienemann-Strasse 2 24306 Plön

Presentation materials

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  1. 1. Welcome and Introductions
    06/05/2026, 10:00
  2. 2. Image acquisition
    06/05/2026, 10:15
    • Image acquisition and acquisition metadata
      • Light parameters: exposure and transmission
      • Image parameters: pixel size and intensity
    • Image formats
      • Brief Bio-Formats introduction
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  3. 3. OMERO overview
    06/05/2026, 10:45
    • How to access OMERO on the web and on the desktop
    • How to organize your images: Projects and Datasets
    • Adding meaning to your images: Annotations with tags, key-value pairs, files, comments, and tables
    • Searching and filtering in and across projects and datasets
    • Loading images into jupyter, R Studio, ImageJ, and napari
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  4. 4. Demo and Exercise: Loading image data into OMERO
    06/05/2026, 11:30
  5. 9. Recap
    07/05/2026, 10:00
  6. 11. Image processing
    07/05/2026, 10:15
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