Microbial community ecology: bridging theory and observations

from Tuesday, 11 July 2023 (16:00) to Friday, 14 July 2023 (23:59)
MPI Plön (Lecture hall - interim building)

        : Sessions
    /     : Talks
        : Breaks
11 Jul 2023
12 Jul 2023
13 Jul 2023
14 Jul 2023
AM
08:45 --- Registration (for late arrivals) ---
09:00
Short introductions (until 09:45) (Lecture hall - interim building)
09:45
Talks & discussion - Emil Mallmin (Max Planck Institute for Evolutionary Biology) (until 10:45) (Lecture hall - interim building)
09:45 From Patterns to Mechanism to Prediction in Microbiome Science - James ODwyer (University of Illinois)   (Lecture hall - interim building)
10:45 --- Coffee break ---
11:00
Talks & discussion - Jules Fraboul (LPENS) (until 12:00) (Lecture hall - interim building)
11:00 Dynamics of high-diversity spatially extended heterogeneous ecosystems - Giulio Biroli (ENS Paris)   (Lecture hall - interim building)
09:00
Talks & discussion - Giulia Garcia Lorenzana (LPENS (ENS), MSC (Universite Paris Cite)) (until 10:30) (Lecture hall - interim building)
09:00 Generalized Random Lotka-Volterra model: number of equilibria, glassiness, and beyond - Ada Altieri (Université Paris Cité)   (Lecture hall - interim building)
09:30 Breakdown of Random-Matrix Universality in Persistent Lotka-Volterra Communities - Joseph Baron (LPENS)   (Lecture hall - interim building)
10:00 Local sign stability and its implications for spectra of sparse random graphs and stability of ecosystems - Pietro Valigi (Università di Roma La Sapienza)   (Lecture hall - interim building)
10:30 --- Coffee break ---
11:00
Talks & discussion - Giulia Garcia Lorenzana (LPENS (ENS), MSC (Universite Paris Cite)) (until 12:00) (Lecture hall - interim building)
11:00 Toward predicting and controlling microbial community dynamics - Daniel Amor (École Normale Supérieure)   (Lecture hall - interim building)
09:00
Talks & discussion - Emil Mallmin (Max Planck Institute for Evolutionary Biology) (until 10:30) (Lecture hall - interim building)
09:00 Bacteria-bacteria interactions between gut-associated Bacteroides strains - Hanna Fokt   (Lecture hall - interim building)
09:55 Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients - Rachel Wheatley   (Lecture hall - interim building)
10:30 --- Coffee break ---
11:00
Talks & discussion - Emil Mallmin (Max Planck Institute for Evolutionary Biology) (until 12:00) (Lecture hall - interim building)
11:00 Empirical modeling of ecological dynamics - Stephan Munch (UC Santa Cruz)   (Lecture hall - interim building)
PM
18:00 --- Registration & mingle ---
19:00 --- Dinner ---
20:00
Opening statement (until 20:20) (Lecture hall - interim building)
20:20
Short introductions (until 21:50) (Lecture hall - interim building)
12:00 --- Lunch ---
13:00
Talks & discussion - Martina Dal Bello (MIT) (until 14:30) (Lecture hall - interim building)
13:00 What I learned from kefir microbiome - Kiran Raosaheb Patil   (Lecture hall - interim building)
13:55 Describing microbial communities using models of cellular resource allocation - Ralf Steuer (Intitute for Theoretical Biology, Humboldt-University of Berlin)   (Lecture hall - interim building)
14:30 --- Coffee break ---
14:45
Talks & discussion - Giulia Garcia Lorenzana (LPENS (ENS), MSC (Universite Paris Cite)) (until 15:45) (Lecture hall - interim building)
14:45 KillerProfiles – Unraveling the effects of deeply divergent predators on the evolution of microbial communities - Jos Kramer (Department of Integrative Biology, ETH Zurich)   (Lecture hall - interim building)
15:15 The implicit Assumptions of Functional Responses - Gian Marco Palamara (University of Bern)   (Lecture hall - interim building)
15:45 --- Optional: Parnass watch tower (2.5km) ---
15:45 --- Optional: Walk around lake Schöhsee (5km) ---
15:45 --- Optional: swim in the lake ---
17:00
Poster session (until 19:00) (Lecture hall - interim building)
17:00 Immunity and competition between bacteria in the gut - Aurore Woller   (Lecture hall - interim building)
17:20 Chaos and noise: disorder in population dynamics - Alejandra Ramirez   (Lecture hall - interim building)
17:40 Genome-assisted characterization and protective role of synthetic microbial community in Arabidopsis thaliana phyllosphere - Vasvi Chaudhry (University of Tübingen)   (Lecture hall - interim building)
18:00 Changes in the root microbiota during the colonization of a pioneer plant after Tropical Glacier retreat - Gisela Rodriguez (Microbial Population Biology Department)   (Lecture hall - interim building)
18:20 Are diverse soil bacterial communities more resistant to extreme temperature events? - Ana-Hermina Ghenu (Institute for Ecology and Evolution, University of Bern)   (Lecture hall - interim building)
18:40 Defining features of distributed metabolism in microbial communities - Alyssa Henderson   (Lecture hall - interim building)
18:40 Interplay of structure and randomness in complex ecological communities - Juan Giral   (Lecture hall - interim building)
18:40 Multilevel selection models for microbiomes - Amanda de Azevedo Lopes (MPI for Evolutionary Biology)   (Lecture hall - interim building)
18:40 Multistability of the gut microbiome in response to drug perturbation - Kate Williamson (MRC Toxicology Unit)   (Lecture hall - interim building)
18:40 Parvilucifera s. and microorganism billiards: breaking free through narrow escapes - medea zanoli (Mediterranean Institute for Advanced Studies (IMEDEA) , Esporles, Spain)   (Lecture hall - interim building)
19:00 --- Dinner (institute) ---
20:00
Talks & discussion - Silvia De Monte (CNRS, IBENS, Paris & MPI Evolutionary Biology, Plon) (until 21:00) (Lecture hall - interim building)
20:00 Statistical analysis of ocean microbes - Sangwon Hyun (University of California, Santa Cruz)   (Lecture hall - interim building)
21:00 --- Drinks & mingle (optional) ---
12:00 --- Lunch ---
13:00
Talks & discussion - Jules Fraboul (LPENS) (until 14:00) (Lecture hall - interim building)
13:00 Single Biotic Interactions Shape Composition of Microbial Communities but Historical Contingency and Evolution Determine Functionality - Thomas Scheuerl   (Lecture hall - interim building)
13:30 Improving Collective Function in Microbial Communities through Bias-Driven Selection - Hyejin Park (Department of Physics, Inha University; Asia Pacific Center for Theoretical Physics (APCTP))   (Lecture hall - interim building)
14:00 --- Coffee break ---
14:10
Talks & discussion - Silvia De Monte (CNRS, IBENS, Paris & MPI Evolutionary Biology, Plon) (until 15:10) (Lecture hall - interim building)
14:10 Artificial evolution of artificial plant- and algae-associated bacterial communities - Ruben Garrido-Oter (Max Planck Institute / Earlham Institute)   (Lecture hall - interim building)
15:10 --- Coffee break ---
15:30
Talks & discussion - Martina Dal Bello (MIT) (until 19:00) (Lecture hall - interim building)
15:30 Exploring the effects of metabolic mutations on cell-cell interactions in spatially structured synthetic microbial communities - Divvya Ramesh (ETH Zürich and Eawag)   (Lecture hall - interim building)
16:00 Sugar-acid dichotomy in the carbon catabolic preferences of heterotrophic bacteria - Matti Gralka (VU Amsterdam)   (Lecture hall - interim building)
19:00 --- Dinner (at restaurant) ---
20:00
QA session (until 21:00) (Lecture hall - interim building)
21:00 --- Return walk ---
12:00 --- Lunch ---
13:00
Talks & discussion - Martina Dal Bello (MIT) (until 14:30) (Lecture hall - interim building)
13:00 On the structuring of bacterioplankton seasonal succession and interannual variation - Jarone Pinhassi (Linnaeus University)   (Lecture hall - interim building)
13:55 Nitrogen fixation increases with diazotroph richness in the global ocean - Dominic Eriksson (ETH Zürich)   (Lecture hall - interim building)
14:30 --- Coffee break ---
14:45
Talks & discussion - Silvia De Monte (CNRS, IBENS, Paris & MPI Evolutionary Biology, Plon) (until 15:45) (Lecture hall - interim building)
14:45 Illuminating interactions between microbial cells in the wild - Alexandra Worden (Max Planck Institute for Evolutionary Biology, Plön, DE; Ocean EcoSystems Biology Unit, GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, DE; Marine Biological Laboratory, Woods Hole, USA )   (Lecture hall - interim building)
15:45
Closing remarks (until 16:15) (Lecture hall - interim building)
16:15 --- End of workshop - Leisure time ---
18:00 --- Barbeque (optional) ---